Systematic evaluation of single-cell foundation model interpretability: attention-derived edge scores add no incremental value over gene-level features for perturbation-target prediction.
Attention-derived edge scores in scFMs add no GRN information beyond baselines.
- Authors / organisation
- Kendiukhov I.
- Venue
- BMC genomics
- Date
- 2026-07-22
- Type
- paper
- Year
- 2026
- DOI
- 10.1186/s12864-026-12965-8
- PMID
- 42482180
- Verification
- Europe PMC
Cited by GlioState topics
Entities mentioned
- Single-cell foundation model Methods & concepts